Last modified by Robin Huisman on 2025/02/27 09:44
<
From version < 36.2 >
edited by Robin Huisman
on 2024/07/31 23:33
To version < 35.1 >
edited by Robin Huisman
on 2024/07/31 23:08
>
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Title
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1 -Lab result file - SIKB0101 v14
1 +Lab result file - SIKB version 14
Content
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1 1  = Exporting lab results to TerraIndex for a customer =
2 2  
3 -Returning the labresults to the client, that requested the analysis on samples.
3 +The file that is used for the examples: [[Example file>>attach:LabResults.xml]]
4 4  
5 -(% class="box infomessage" %)
6 -(((
7 -More information about SIKB0101 can be found here: [[https:~~/~~/www.sikb.nl/datastandaarden/sikb0101-bodembeheer>>url:https://www.sikb.nl/datastandaarden/sikb0101-bodembeheer]]
8 -)))
5 +{{toc/}}
9 9  
7 +{{warning}}
8 +SIKB Version 9 is obsolete, and replaced with version 13 or version 14. Latest version can be found here: [[https:~~/~~/www.sikb.nl/datastandaarden/sikb0101-bodembeheer>>url:https://www.sikb.nl/datastandaarden/sikb0101-bodembeheer]]
9 +{{/warning}}
10 10  
11 -
12 12  == What is a Lab result file? ==
13 13  
14 14  A lab result file is an XML file contains all the lab results. The results are mapped tot their analyses samples. A lab result will be matched to the corresponding analyses sample based on the: “Labassignment Guid/SIKB-ID, projectCode, AnalysisSample Guid/SIKB-ID”
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18 18  
19 19  **XSD**: Ask or SIKB Members can download from: [[https:~~/~~/www.sikb.nl/datastandaarden/richtlijnen/sikb0101>>url:https://www.sikb.nl/datastandaarden/richtlijnen/sikb0101]]
20 20  
21 -**Controle XSLT**: [[attach:Labresult_Controle.xsl||rel=" noopener noreferrer" target="_blank"]]
20 +**Controle XSLT**:
22 22  
23 23  **Domaintable files**: [[immetingen lookup v14.8.0.xml>>url:https://wiki.terraindex.com/bin/download/Implementation%20documentation/Setting%20up%20Lab%20communication%20by%20REST%20services%20with%20TerraIndex/Lab%20assignment%20file/WebHome/immetingen%20lookup%20v14.8.0.xml?rev=1.2]]   [[imsikb0101 lookup v14.8.0.xml>>url:https://wiki.terraindex.com/bin/download/Implementation%20documentation/Setting%20up%20Lab%20communication%20by%20REST%20services%20with%20TerraIndex/Lab%20assignment%20file/WebHome/imsikb0101%20lookup%20v14.8.0.xml?rev=1.1]]
24 24  extracted from: **[[https:~~/~~/codes.sikb.nl>>url:https://codes.sikb.nl/]] **
25 25  
26 26  
27 -{{toc/}}
28 28  
29 -
30 -== Model Structure ==
31 -
32 32  [[image:IMSIKB0101 - Labresults.png]]
33 33  
34 -=== Metadata ===
29 +== File structure ==
35 35  
36 36  
37 37  (% class="table-hover" %)
38 38  |(% colspan="1" rowspan="1" %)**Attribute name**|(% colspan="1" rowspan="1" %)**Description**|(% colspan="1" rowspan="1" %)**Unit**
39 -|(% colspan="1" rowspan="1" %)**version**|(% colspan="1" rowspan="1" %)The SIKB version of the lab results file. This must be: **14.8.0 or 14.9.0**|(% colspan="1" rowspan="1" %)string
40 -|(% colspan="1" rowspan="1" %)**application**|(% colspan="1" rowspan="1" %)This is the application code of your LIMS system that you will get from TerraIndex. Be careful this is not the same code as your laboratory number. Your applicationcode can be requested of found here: [[https:~~/~~/codes.sikb.nl/tablet/domain-table-details/50be26c9-5e66-46c9-9373-9d402762876f>>https://codes.sikb.nl/tablet/domain-table-details/50be26c9-5e66-46c9-9373-9d402762876f]] |(% colspan="1" rowspan="1" %)Integer
41 -|(% colspan="1" rowspan="1" %)**reportDate**|(% colspan="1" rowspan="1" %)The date on which the lab result file was made|(% colspan="1" rowspan="1" %)(((
34 +|(% colspan="1" rowspan="1" %)**Versie**|(% colspan="1" rowspan="1" %)The SIKB version of the lab assignment. This must be: **9.0.0**|(% colspan="1" rowspan="1" %)string
35 +|(% colspan="1" rowspan="1" %)**Applicatiecode**|(% colspan="1" rowspan="1" %)This is the application code of your LIMS system that you will get from TerraIndex. Be careful this is not the same code as your laboratory number|(% colspan="1" rowspan="1" %)Integer
36 +|(% colspan="1" rowspan="1" %)**Datum**|(% colspan="1" rowspan="1" %)The date on which the lab result file was made|(% colspan="1" rowspan="1" %)(((
42 42  date
43 43  
44 44  yyyy-mm-dd
45 45  )))
46 -|(% colspan="1" rowspan="1" %)**supplier**|(% colspan="1" rowspan="1" %)The number you get from TerraIndex. This needs to be the same as the laboratorium number in the lab delivery file. Your supplier code can be requested of found here: [[https:~~/~~/codes.sikb.nl/tablet/domain-table-details/dc2ad4df-f958-4146-aee8-31f8c2f1c74b>>https://codes.sikb.nl/tablet/domain-table-details/dc2ad4df-f958-4146-aee8-31f8c2f1c74b]]|(% colspan="1" rowspan="1" %)string
47 -|(% colspan="1" rowspan="1" %)**dataflow**|(% colspan="1" rowspan="1" %)Should be '1' in this case, what stands voor 'AnalysisResults'. Other option can be found here: [[https:~~/~~/codes.sikb.nl/tablet/domain-table-details/79365ded-f56a-4f10-ba45-16bac69752d9>>https://codes.sikb.nl/tablet/domain-table-details/79365ded-f56a-4f10-ba45-16bac69752d9]]|(% colspan="1" rowspan="1" %)integer
41 +|(% colspan="1" rowspan="1" %)**Klantcode**|(% colspan="1" rowspan="1" %)This should be the customer code in the “//klantcode//” in the lab assignment|(% colspan="1" rowspan="1" %)string
42 +|(% colspan="1" rowspan="1" %)**Laboratorium**|(% colspan="1" rowspan="1" %)The number you get from TerraIndex. This needs to be the same as the laboratorium number in the lab delivery file|(% colspan="1" rowspan="1" %)integer
43 +|(% colspan="1" rowspan="1" %)**Taal**|(% colspan="1" rowspan="1" %)(((
44 +The language of the lab results this depends on the XSD used.
48 48  
49 -===
50 -Labassignment ===
46 +dut = dutch
51 51  
52 -The labassignmentpart is the same as in the labassignment: [[Lab assignment file - SIKB0101 v14>>https://wiki.terraindex.com/bin/view/Implementation%20documentation/Setting%20up%20Lab%20communication%20by%20REST%20services%20with%20TerraIndex/Lab%20assignment%20file/#]]
48 +eng = English
49 +)))|(% colspan="1" rowspan="1" %)string
50 +|(% colspan="1" rowspan="1" %)**Projectgegevens**|(% colspan="1" rowspan="1" %)This section contains all the result information|(% colspan="1" rowspan="1" %)-
53 53  
54 -With 3 differences:
52 += Questions from Luca to Robin =
55 55  
56 -* Status on the labassignment itself
57 -* Status on the labassignment.sample link
58 -* The labassignment Report number can be send in: LabAssignmentCertificate
54 +1. Do I need to add any other classes to the filestructure description apart from the ones below (those related to the IMMetingen::Result Class) ?
55 +1. uit de mail van Robin : "Je kunt de Labassignment pagina als basis gebruiken, en de extra klasses vanuit de Voorbeeld bestand LabResult aan toevoegen."
56 +11. De link naar een "LabResult" voorbeeld bestand wijst naar een directory. Daar staat wel een directory met naam "Example XML 14.8.01". maar die folder bevat niet 1 maar 4 verschillende "labresult_*" XMLs. Welke moet ik hebben? allemaal? en hoe moet ik afleiden welke klasses "extra" zijn? welke tool zou je aanbevelen om xml te lezen. ik heb er nog nooit mee gewerkt.
57 +1. Do i need to add screenshots of the xml classes as in the labassignment and labdelivery pages? if so, what software did you use?
58 +1. In Validation: ValidationScore. What are STOWA Protocols? is it Stichting Toegepast Onderzoek Waterbeheer?
59 +1. What to do with the domain tables refered to in the descriptions? Does it make sense to reference them? Should i translate the names of the domain tables or is that static? are they translated already? who manages these? is it SIKB stuff?
60 +1. in the section MeasureUncertainty > link to pdf file in description is invalid. What should it be?
61 +1. SIKB 14 Parameter result combinations> first sentence makes no sense to me. Please review so i can translate.
62 +1. What should i do with the sections from "Structure projectgegevens" to "What to exchange to store the right results?"? Is this a result of a copy paste and can they be discarded? If not, what classes do they refer to and where can i find the descriptions to be translated?
59 59  
64 +(% class="wikigeneratedid" %)
65 +~==== Added by luca: all Classes related to "IMMetingen::Results"
60 60  
61 -
62 62  ==== MeasureResult ====
63 63  
64 64  
... ... @@ -107,8 +107,37 @@
107 107  
108 108  ==== ====
109 109  
110 -==== ====
115 +==== Validation ====
111 111  
117 +
118 +This DataClass contains optional attributes and indicates which validation steps the measureResult (measurement value) has undergone.
119 +
120 +
121 +|**Attribute Name**|**Description**
122 +|(((
123 +**automatedControl** GenericName
124 +)))|(((
125 +The first-line control is often an automated check of whether the measurement value is correct. It uses a domain table: ValidationSteps.
126 +
127 +Various steps can be distinguished. For example, a check on hard/soft limits, ion balance, bandwidth, and dissolved not exceeding total analysis (chemistry) are part of the first-line control. The control can be approved or disapproved (see quality judgment). Different possible values are described in the domain table ValidationSteps. Example: pH of 78 and water temperature of 123 degrees Celsius are hard limits (not possible); pH=10.0 is a soft limit because the value is extremely high (but not impossible).
128 +
129 +Domain table: ValidationSteps
130 +)))
131 +|(((
132 +**expertControl** GenericName
133 +)))|(((
134 +The second-line control (ExpertControl) is often a specialist check of whether the measurement value is correct. It also uses a domain table: ValidationSteps. Here, different steps can be distinguished as well. This analysis usually does not follow immediately after arrival but is performed periodically. Controls on correlation between measurement stations, history, correlations between parameters, and specialist expertise belong to the second-line control. The control can be approved or disapproved (see quality judgment). Different possible values are described in the domain table ValidationSteps.
135 +
136 +Domain table: ValidationSteps
137 +)))
138 +|(((
139 +**validationScore** GenericName
140 +)))|(((
141 +Score of the validation steps followed, according to the __**STOWA protocols**__. The attribute uses the domain table ValidationScore. The score value ranges from 0 to 5
142 +
143 +Domain table: ValidationScore
144 +)))
145 +
112 112  ==== ====
113 113  
114 114  ==== AnalyticResult ====
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139 139  
140 140  ==== ====
141 141  
142 -==== ====
176 +==== MeasureUncertainty ====
143 143  
178 +
179 +Measurement uncertainty in the result. This is the expanded measuring uncertainty as described in the document: [[http:~~/~~/www.nordicinnovation.net/nordtestfiler/tec537.pdf>>http://www.nordicinnovation.net/nordtestfiler/tec537.pdf]]
180 +
181 +
182 +|=**Attribute Name**|=**Description**
183 +|(((
184 +**distributionType** GenericName
185 +)))|(((
186 +The type of statistical distribution associated with the observation.
187 +
188 +Domain table: ProbabilityDistribution
189 +)))
190 +|(((
191 +**statisticalParameter** Measure
192 +)))|(((
193 +Parameters that determine the shape and size of the statistical distribution.
194 +
195 +Domain table: StatisticalParameter
196 +)))
197 +
144 144  ==== ====
145 145  
146 -====
147 - ====
200 +==== DeterminationLimits ====
148 148  
202 +
203 +|=**Attribute Name**|=**Description**
204 +|(((
205 +**detectionLimit** Measure
206 +)))|(((
207 +The smallest value of the measured content or the observed value of the parameter in a sample, which can still be determined with a certain reliability by the laboratory. Conventionally, this is the amount that corresponds to three times the standard deviation at that level (thus, relative standard deviation is 33%).
208 +
209 +
210 +The standard deviation is established under (intra-lab) reproducibility. Also known in English as 'LOD' (Limit of Detection). See also: [[Wikipedia on Detection Limit>>url:https://en.wikipedia.org/wiki/Detection_limit]]
211 +)))
212 +|(((
213 +**reportingLimit** Measure
214 +)))|The smallest value of the measured content or the observed value of the parameter in a sample, agreed upon with the client by the executing laboratory, which is reported to the client. The reporting limit is at least the detection limit and is sometimes specified in an accreditation scheme like AS3000.
215 +|(((
216 +**limitSymbolReferenceCode **GenericName
217 +)))|(((
218 +The threshold value that the limitSymbol of AnalyticResult refers to.
219 +
220 +Domain table: LimitSymbolReference
221 +)))
222 +|(((
223 +**quantitationLimit** Measure
224 +)))|The smallest value of the measured content or the observed value of the parameter in a sample, which can still be determined with a certain reliability by the laboratory. Conventionally, this is the amount that corresponds to ten times the standard deviation at that level (thus, relative standard deviation is 10%). Also known in English as 'LOQ' (Limit of Quantitation). At this value, the rate of 'false negatives' is less than 1%.
225 +
226 +=== ===
227 +
149 149  === Structure projectgegevens ===
150 150  
151 151  (% style="text-align:center" %)
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215 215  
216 216  = =
217 217  
218 -= What to exchange to bind the right results to the right sample? =
297 += What to exchange to store the right results? =
219 219  
220 -The data stream ‘Lab Result’ is the feedback of analysis results on the requested lab assignment at a laboratory. At import we need to bind it onto the correct sample.
299 +The data stream ‘Lab Result’ is the feedback of analysis results on the requested lab assignment at a laboratory.
221 221  
222 -This requires importand field to match the samples in the xml to the samples in our database.
223 -
224 224  **Important fields:**
225 225  
226 226  |=Entity|=Fixed value|=Remark
... ... @@ -239,7 +239,7 @@
239 239  * For Asbestos and Asphalt, new samples are also created at the Lab, which are therefore fed back with a reference to the sample from which they are derived.
240 240  * There is still a desire to feedback from a lab whether an analysis sample has been modified at the lab in terms of sub-samples. For example, if a jar has broken and been replaced with another jar. This has not yet been included in current practices.
241 241  
242 -**Importing the data will be done based on the following steps:**
319 +**Importing the data can be done based on the following steps:**
243 243  
244 244  * Search Project with Project.lokaalID (as placed in the Lab assignment XML).
245 245  * Search Project with Project.ProjectCode (as placed in the Lab assignment XML) if searching on Project.LokaalID yields no results.
... ... @@ -253,7 +253,6 @@
253 253  * If an Analysis Sample is found, the Analysis Results are always updated or added.
254 254  * If Project is found, but the analysis sample is not; then this analysis sample is imported as a new analysis sample with all results.
255 255  * (If it concerns water samples, a new fictional/temporary measuring point and filter could be created.)
256 -*
257 257  
258 258  = SIKB 14 Parameter result combinations =
259 259  
... ... @@ -262,12 +262,6 @@
262 262  \\[[image:1713183008796-215.png]]
263 263  *small remark, condition will be used as: [0..1]
264 264  
265 -Domaintables bound to these fields:
266 -
267 -* Quantity -[[ Parameter, but only group/groep: Grootheid (Quantity)>>https://codes.sikb.nl/tablet/domain-table-details/0eafa483-2875-4c94-890d-66258a6b4d88]]
268 -* Parameter -[[ Parameter, but mainly group/groep: Chemische Stof (Chemical substance)>>https://codes.sikb.nl/tablet/domain-table-details/0eafa483-2875-4c94-890d-66258a6b4d88]]
269 -* Condition - Condition, but not group/groeps that refer to Chemical substance.
270 -
271 271  The combinations are defined for different compartiments like soil/ground, groundwater, wastewater.
272 272  Below are some examples, and some attachments included to support all combinations.
273 273  
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274 274  **2 Examples for Soil:**
275 275  
276 276  |__**Parameter Name**__|__**Parameter ID**__|__**Quantity ID**__|__**Quantity name**__|__**Condition ID**__|__**Condition Name**__
277 -|lood
278 -(lead)|1116|2725|Massafractie
279 -(Massfraction)|1|t.o.v. drooggewicht
280 -(relative to dry weight)
281 -|minerale olie
282 -(minerale oil)|1200|2725|Massafractie
283 -(Massfraction)|93|koolwaterstoffractie C10-C40 / drooggewicht
284 -(hydrocarbon fraction C10-C40 / dry weight)
347 +|lood|1116|2725|Massafractie|1|t.o.v. drooggewicht
348 +|minerale olie|1200|2725|Massafractie|93|koolwaterstoffractie C10-C40 / drooggewicht
285 285  
286 286  **2 Examples for Groundwater:**
287 287  
288 288  |__**Parameter Name**__|__**Parameter ID**__|__**Quantity ID**__|__**Quantity name**__|__**Condition ID**__|__**Condition Name**__|
289 289  |cyanide-complex|2595|2720|(massa)Concentratie|9|opgeloste fractie (bijv. na filtratie)
290 -|som 29 dioxines (TEQ)|2160|2720|(massa)Concentratie|10|uitgedrukt in Toxiciteit equivalenten
354 +|som 29 dioxines (Bbk, 1-10-2010, als TEQ)|2160|2720|(massa)Concentratie|10|uitgedrukt in Toxiciteit equivalenten
291 291  
292 292  **2 Examples for Wastewater:**
293 293  
294 294  |__**Parameter Name**__|__**Parameter ID**__|__**Quantity ID**__|__**Quantity name**__|__**Condition ID**__|__**Condition Name**__|
295 295  |cyanide-complex|2595|2720|(massa)Concentratie|8|Niet van toepassing
296 -|som 29 dioxines (TEQ)|2160|2720|(massa)Concentratie|10|uitgedrukt in Toxiciteit equivalenten
360 +|som 29 dioxines (Bbk, 1-10-2010, als TEQ)|2160|2720|(massa)Concentratie|10|uitgedrukt in Toxiciteit equivalenten
297 297  
298 298  __**Full combinations sheet:  **__[[attach:Full List of AnalysisResult combinations 04-2024.xlsx||rel="noopener noreferrer" target="_blank"]]
299 299  
300 -We can help you with the right combinations and mappings to your own codes.
301 301  
302 302  
303 -
304 304  
Labresult_Controle.xsl
Author
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1 -XWiki.RobinHuisman
Size
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1 -23.4 KB
Content
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1 -<?xml version="1.0" encoding="utf-8"?>
2 -<!--XSLT Labresult_Controle.xsl versie 4.1 - SIKB0101 versie 14.8.0-->
3 -<xsl:stylesheet version="2.0" xmlns:xsl="http://www.w3.org/1999/XSL/Transform" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:xsi="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xdt="http://www.w3.org/2005/xpath-datatypes" xmlns:imsikb0101="http://www.sikb.nl/imsikb0101" xmlns:immetingen="http://www.sikb.nl/immetingen" xmlns:gco="http://www.isotc211.org/2005/gco" xmlns:gmd="http://www.isotc211.org/2005/gmd" xmlns:gsr="http://www.isotc211.org/2005/gsr" xmlns:gss="http://www.isotc211.org/2005/gss" xmlns:gts="http://www.isotc211.org/2005/gts" xmlns:gml="http://www.opengis.net/gml/3.2" xmlns:om="http://www.opengis.net/om/2.0" xmlns:sam="http://www.opengis.net/sampling/2.0" xmlns:sams="http://www.opengis.net/samplingSpatial/2.0" xmlns:spec="http://www.opengis.net/samplingSpecimen/2.0" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xs="http://www.w3.org/2001/XMLSchema"
4 -xmlns:sikb="http://xslcontrole.sikb"
5 - xsi:schemaLocation="http://www.sikb.nl/imsikb0101 imsikb0101_v14.8.0.xsd">
6 - <xsl:output method="xml" indent="yes" />
7 - <xsl:template match="/">
8 - <ArrayOfLogRecord>
9 -
10 - <!-- file dataflow check -->
11 - <xsl:if test="count(//imsikb0101:metaData/imsikb0101:dataflow) &lt; 1">
12 - <xsl:copy-of select="sikb:createRecord('WARNING','imsikb0101:metaData/imsikb0101:dataflow','Er zou een metadata/dataflow ingevuld moeten zijn.')"/>
13 - </xsl:if>
14 - <xsl:if test="lower-case(//imsikb0101:metaData/imsikb0101:dataflow) != lower-case('urn:imsikb0101:DatastroomType:id:1')">
15 - <xsl:copy-of select="sikb:createRecord('WARNING','imsikb0101:metaData/imsikb0101:dataflow','Het veld metadata/dataflow zou ingevuld moeten zijn met: urn:imsikb0101:DatastroomType:id:1. Als dit geen Labresultaat-xml is, kies dan voor een andere controle xslt.')"/>
16 - </xsl:if>
17 -
18 - <xsl:if test="count(//imsikb0101:LabAssignment) != 1">
19 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignment','Er moet precies 1 labopdracht aanwezig zijn.')"/>
20 - </xsl:if>
21 - <xsl:variable name="plGUID" select="replace(//imsikb0101:LabAssignment/imsikb0101:belongsToProject/@xlink:href,'#','')" />
22 - <xsl:if test="$plGUID = ''">
23 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignment/belongsToProject','Er moet Project gekoppeld zijn.')"/>
24 - </xsl:if>
25 - <xsl:if test="count(//imsikb0101:Project[@gml:id = $plGUID]) != 1">
26 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Project', string-join(('Er moet een Project meegeleverd zijn; gml:id =', $plGUID), ' ') )"/>
27 - </xsl:if>
28 -
29 - <xsl:if test="count(//imsikb0101:LabAssignment//imsikb0101:LabAssignmentCertificate) != 1">
30 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignmentCertificate','Er moet een LabAssignmentCertificate in LabAssignment aanwezig zijn.')"/>
31 - </xsl:if>
32 -
33 - <xsl:if test="count(//imsikb0101:LabAssignment//imsikb0101:SampleAnalysisRequest) = 0">
34 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:SampleAnalysisRequest','Er moet een SampleAnalysisRequest in LabAssignment aanwezig zijn.')"/>
35 - </xsl:if>
36 -
37 - <xsl:for-each select="//imsikb0101:LabAssignment//imsikb0101:SampleAnalysisRequest">
38 - <xsl:if test="count(.//imsikb0101:sample) != 1">
39 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Sample','Er moet een Sample in SampleAnalysisRequest aanwezig zijn.')"/>
40 - </xsl:if>
41 - </xsl:for-each>
42 -
43 - <xsl:for-each select="//imsikb0101:Sample">
44 - <xsl:variable name="samGUID" select="@gml:id" />
45 - <xsl:variable name="specimenType" select="spec:specimenType/@xlink:href" />
46 -
47 - <xsl:if test="$specimenType = ''">
48 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Sample', string-join(('Er moet een specimenType in Sample aanwezig zijn; Sample gml:id =', $samGUID), ' ') )"/>
49 - </xsl:if>
50 - <xsl:if test="contains($specimenType,':10') or contains($specimenType,':7') or contains($specimenType,':8') or contains($specimenType,':9') ">
51 - <!-- AnalysisSamples/Materiaalmonsters/Zeefmonsters/Uitloogmonster schould contain Analysis-->
52 - <xsl:if test="count(descendant::immetingen:Analysis) &gt; 0">
53 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Analysis', string-join(('Er mag geen Analysis relationeel gekoppeld zijn in Sample; Sample gml:id =', $samGUID), ' ') )"/>
54 - </xsl:if>
55 - <xsl:if test="count(descendant::sam:relatedObservation[string-length(@xlink:href) > 1]) &lt; 1">
56 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Analysis', string-join(('Er moet een link naar Analysis in Sample aanwezig zijn; Sample gml:id =', $samGUID), ' ') )"/>
57 - </xsl:if>
58 -
59 - </xsl:if>
60 - </xsl:for-each>
61 -
62 - <xsl:for-each select="//immetingen:Analysis">
63 - <xsl:variable name="arGUID" select="@gml:id" />
64 -
65 - <xsl:variable select="string(om:result/@*)" name="arType"/>
66 - <xsl:if test="not(contains($arType,'immetingen:AnalyticResultType'))">
67 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:AnalyticResult', string-join(('Er moet een AnalyticResult in Analysis aanwezig zijn; Analysis gml:id =', $arGUID), ' ') )"/>
68 - </xsl:if>
69 -
70 - <!-- Check AnalysisProcess -->
71 - <xsl:variable select="replace(om:procedure/@xlink:href,'#','')" name="prLiGUID"/>
72 - <xsl:variable select="om:procedure/*/@gml:id" name="prInGUID"/>
73 -
74 - <xsl:if test="concat($prInGUID,'', $prLiGUID) != ''">
75 - <xsl:if test="count(//immetingen:AnalysisProcess[@gml:id = concat($prInGUID,'', $prLiGUID)]) != 1">
76 - <xsl:copy-of select="sikb:createRecord('ERROR','immetingen:AnalysisProcess', string-join(('Analysis verwijst niet naar procedure van type: AnalysisProcess; Analysis gml:id =', $arGUID), ' ') )"/>
77 - </xsl:if>
78 - </xsl:if>
79 -
80 - </xsl:for-each>
81 -
82 -
83 - <xsl:apply-templates select="//imsikb0101:metaData" />
84 - <xsl:apply-templates select="//imsikb0101:SourceSystem" />
85 - <xsl:apply-templates select="//imsikb0101:LabAssignment" />
86 - <xsl:apply-templates select="//imsikb0101:LabAssignmentRequest" />
87 - <xsl:apply-templates select="//imsikb0101:LabAssignmentCertificate" />
88 - <xsl:apply-templates select="//imsikb0101:AsbestosComposition" />
89 - <xsl:apply-templates select="//immetingen:AnalyticResult" />
90 - <xsl:apply-templates select="//immetingen:Package" />
91 - <xsl:apply-templates select="//imsikb0101:featureMember" />
92 - <!--
93 - <xsl:apply-templates select="//imsikb0101:Address" />
94 - <xsl:apply-templates select="//imsikb0101:Person" />
95 - <xsl:apply-templates select="//imsikb0101:Organization" />
96 - -->
97 -
98 - <!-- single fields check -->
99 - <xsl:apply-templates select="//imsikb0101:remarks" />
100 -
101 - <!-- saxon levert nog een error in de RegExp : Waarom ???-->
102 - <xsl:apply-templates select="//om:resultTime" />
103 -
104 -
105 - </ArrayOfLogRecord>
106 - </xsl:template>
107 - <!-- lengte /verplichting van metadata velden -->
108 - <xsl:template match="imsikb0101:metaData">
109 - <xsl:if test="count(imsikb0101:application) != 1">
110 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','application bij metaData moet aanwezig zijn.')" />
111 - </xsl:if>
112 - <xsl:if test="count(imsikb0101:date) != 1">
113 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','date bij metaData moet aanwezig zijn.')" />
114 - </xsl:if>
115 - <xsl:if test="count(imsikb0101:supplier) != 1">
116 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','supplier bij metaData moet aanwezig zijn.')" />
117 - </xsl:if>
118 - <xsl:if test="count(imsikb0101:organisation) != 1">
119 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','organisation bij metaData moet aanwezig zijn.')" />
120 - </xsl:if>
121 - <xsl:if test="count(imsikb0101:version) != 1">
122 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','version bij metaData moet aanwezig zijn.')" />
123 - </xsl:if>
124 - <xsl:if test="count(imsikb0101:organisation) &gt;0">
125 - <xsl:if test="string-length(imsikb0101:organisation) &gt; 60">
126 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','Lengte van organisation bij metaData is meer dan 60 karakters.')" />
127 - </xsl:if>
128 - </xsl:if>
129 - <xsl:if test="count(imsikb0101:version) &gt;0">
130 - <xsl:if test="string-length(imsikb0101:version) &gt; 8">
131 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:metaData','Lengte van version bij metaData is meer dan 8 karakters.')" />
132 - </xsl:if>
133 - </xsl:if>
134 - </xsl:template>
135 - <!-- lengte (/verplichting) van overige velden -->
136 - <xsl:template match="imsikb0101:SourceSystem">
137 - <xsl:if test="count(imsikb0101:applicationID) > 0">
138 - <xsl:if test="string-length(imsikb0101:applicationID) &gt; 20">
139 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:SourceSystem',string-join(('Lengte van applicationID bij SourceSystem is meer dan 20 karakters.'),' '))" />
140 - </xsl:if>
141 - </xsl:if>
142 - </xsl:template>
143 - <xsl:template match="imsikb0101:LabAssignment">
144 - <xsl:if test="count(imsikb0101:customerCode) != 1">
145 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignment','customerCode bij LabAssignment moet aanwezig zijn.')" />
146 - </xsl:if>
147 - <xsl:if test="count(imsikb0101:customerCode) &gt; 0">
148 - <xsl:if test="string-length(imsikb0101:customerCode) &gt; 20">
149 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignment','Lengte van customerCode bij LabAssignment is meer dan 20 karakters.')" />
150 - </xsl:if>
151 - </xsl:if>
152 -
153 - <!-- Check ProjectLeader is Person -->
154 - <xsl:variable select="replace(imsikb0101:projectLeader/@xlink:href,'#','')" name="prLiGUID"/>
155 - <xsl:variable select="imsikb0101:projectLeader/*/@gml:id" name="prInGUID"/>
156 -
157 - <xsl:if test="concat($prInGUID,'', $prLiGUID) != ''">
158 - <xsl:if test="count(//immetingen:Person[@gml:id = concat($prInGUID,'', $prLiGUID)]) != 1">
159 - <xsl:copy-of select="sikb:createRecord('ERROR','immetingen:Person', 'projectLeader van de labopdracht verwijst niet naar subject van type: imsikb0101:Person.' )"/>
160 - </xsl:if>
161 - </xsl:if>
162 -
163 - </xsl:template>
164 - <xsl:template match="imsikb0101:LabAssignmentRequest">
165 - <xsl:if test="count(imsikb0101:orderNumber) &gt;0">
166 - <xsl:if test="string-length(imsikb0101:orderNumber) &gt; 25">
167 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignmentRequest',string-join(('Lengte van orderNumber bij LabAssignmentRequest is meer dan 25 karakters.'),' '))" />
168 - </xsl:if>
169 - </xsl:if>
170 - </xsl:template>
171 - <xsl:template match="imsikb0101:LabAssignmentCertificate">
172 - <xsl:if test="count(imsikb0101:labCertificatePdfLink) &gt;0">
173 - <xsl:if test="string-length(imsikb0101:labCertificatePdfLink) &gt; 2000">
174 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:LabAssignmentCertificate',string-join(('Lengte van labCertificatePdfLink bij LabAssignmentCertificate is meer dan 2000 karakters.'),' '))" />
175 - </xsl:if>
176 - </xsl:if>
177 - <xsl:if test="string-length(imsikb0101:labCertificateNumber) &lt;1">
178 - <xsl:copy-of select="sikb:createRecord('WARNING','imsikb0101:LabAssignmentCertificate',string-join(('Het invullen van het labCertificateNumber is wenselijk voor een goede uitwisseling.'),' '))" />
179 - </xsl:if>
180 - </xsl:template>
181 - <xsl:template match="imsikb0101:AsbestosComposition">
182 - <xsl:if test="count(imsikb0101:searchPartDescription) &gt;0">
183 - <xsl:if test="string-length(imsikb0101:searchPartDescription) &gt; 20">
184 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:AsbestosComposition',string-join(('Lengte van searchPartDescription bij AsbestosComposition is meer dan 20 karakters.'),' '))" />
185 - </xsl:if>
186 - </xsl:if>
187 - </xsl:template>
188 - <xsl:template match="immetingen:AnalyticResult">
189 - <xsl:if test="count(immetingen:alphanunericValue) &gt;0">
190 - <xsl:if test="string-length(immetingen:alphanunericValue) &gt; 20">
191 - <xsl:copy-of select="sikb:createRecord('ERROR','immetingen:AnalyticResult',string-join(('Lengte van alphanunericValue bij AnalyticResult is meer dan 20 karakters.'),' '))" />
192 - </xsl:if>
193 - </xsl:if>
194 -
195 - </xsl:template>
196 - <xsl:template match="immetingen:Package">
197 - <xsl:if test="count(immetingen:barcode) > 0">
198 - <xsl:if test="string-length(immetingen:barcode) &gt; 15">
199 - <xsl:copy-of select="sikb:createRecord('ERROR','immetingen:Package',string-join(('Lengte van barcode bij Package is meer dan 15 karakters.'),' '))" />
200 - </xsl:if>
201 - </xsl:if>
202 - <xsl:if test="count(immetingen:name) > 0">
203 - <xsl:if test="string-length(immetingen:name) &gt; 20">
204 - <xsl:copy-of select="sikb:createRecord('ERROR','immetingen:Package',string-join(('Lengte van name bij Package is meer dan 20 karakters.'),' '))" />
205 - </xsl:if>
206 - </xsl:if>
207 - </xsl:template>
208 - <!--
209 - <xsl:template match="imsikb0101:Address">
210 - <xsl:variable select="@gml:id" name="prGUID" />
211 - <xsl:if test="count(imsikb0101:districtCode) &gt;0">
212 - <xsl:if test="string-length(imsikb0101:districtCode) &gt; 4">
213 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Address',string-join(('Lengte van districtCode bij Address',$prGUID,'is meer dan 4 karakters.'),' '))" />
214 - </xsl:if>
215 - </xsl:if>
216 - <xsl:if test="count(imsikb0101:letter) &gt;0">
217 - <xsl:if test="string-length(imsikb0101:letter) &gt; 1">
218 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Address',string-join(('Lengte van letter bij Address',$prGUID,'is meer dan 1 karakters.'),' '))" />
219 - </xsl:if>
220 - </xsl:if>
221 - <xsl:if test="count(imsikb0101:letterAddition) &gt;0">
222 - <xsl:if test="string-length(imsikb0101:letterAddition) &gt; 4">
223 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Address',string-join(('Lengte van letterAddition bij Address',$prGUID,'is meer dan 4 karakters.'),' '))" />
224 - </xsl:if>
225 - </xsl:if>
226 - <xsl:if test="count(imsikb0101:city) &gt;0">
227 - <xsl:if test="string-length(imsikb0101:city) &gt; 80">
228 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Address',string-join(('Lengte van city bij Address',$prGUID,'is meer dan 80 karakters.'),' '))" />
229 - </xsl:if>
230 - </xsl:if>
231 - <xsl:if test="count(imsikb0101:zipcode) &gt;0">
232 - <xsl:if test="string-length(imsikb0101:zipcode) &gt; 6">
233 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Address',string-join(('Lengte van zipcode bij Address',$prGUID,'is meer dan 6 karakters.'),' '))" />
234 - </xsl:if>
235 - </xsl:if>
236 - <xsl:if test="count(imsikb0101:street) &gt;0">
237 - <xsl:if test="string-length(imsikb0101:street) &gt; 80">
238 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Address',string-join(('Lengte van street bij Address',$prGUID,'is meer dan 80 karakters.'),' '))" />
239 - </xsl:if>
240 - </xsl:if>
241 - </xsl:template>
242 - <xsl:template match="imsikb0101:Person">
243 - <xsl:variable select="@gml:id" name="prGUID" />
244 - <xsl:if test="count(imsikb0101:email) &gt;0">
245 - <xsl:if test="string-length(imsikb0101:email) &gt; 100">
246 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van email bij Person',$prGUID,'is meer dan 100 karakters.'),' '))" />
247 - </xsl:if>
248 - </xsl:if>
249 - <xsl:if test="count(imsikb0101:fax) &gt;0">
250 - <xsl:if test="string-length(imsikb0101:fax) &gt; 20">
251 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van fax bij Person',$prGUID,'is meer dan 20 karakters.'),' '))" />
252 - </xsl:if>
253 - </xsl:if>
254 - <xsl:if test="count(imsikb0101:telephoneNumber) &gt;0">
255 - <xsl:if test="string-length(imsikb0101:telephoneNumber) &gt; 20">
256 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van telephoneNumber bij Person',$prGUID,'is meer dan 20 karakters.'),' '))" />
257 - </xsl:if>
258 - </xsl:if>
259 - <xsl:if test="count(imsikb0101:mobileNumber) &gt;0">
260 - <xsl:if test="string-length(imsikb0101:mobileNumber) &gt; 20">
261 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van mobileNumber bij Person',$prGUID,'is meer dan 20 karakters.'),' '))" />
262 - </xsl:if>
263 - </xsl:if>
264 - <xsl:if test="count(imsikb0101:civilserviceNumber) &gt;0">
265 - <xsl:if test="string-length(imsikb0101:civilserviceNumber) &gt; 9">
266 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van civilserviceNumber bij Person',$prGUID,'is meer dan 9 karakters.'),' '))" />
267 - </xsl:if>
268 - </xsl:if>
269 - <xsl:if test="count(imsikb0101:lastName) &gt;0">
270 - <xsl:if test="string-length(imsikb0101:lastName) &gt; 60">
271 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van lastName bij Person',$prGUID,'is meer dan 60 karakters.'),' '))" />
272 - </xsl:if>
273 - </xsl:if>
274 - <xsl:if test="count(imsikb0101:firstName) &gt;0">
275 - <xsl:if test="string-length(imsikb0101:firstName) &gt; 80">
276 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Person',string-join(('Lengte van firstName bij Person',$prGUID,'is meer dan 80 karakters.'),' '))" />
277 - </xsl:if>
278 - </xsl:if>
279 - </xsl:template>
280 - <xsl:template match="imsikb0101:Organization">
281 - <xsl:variable select="@gml:id" name="prGUID" />
282 - <xsl:if test="count(imsikb0101:name) &gt;0">
283 - <xsl:if test="string-length(imsikb0101:name) &gt; 100">
284 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Organization',string-join(('Lengte van name bij Organization',$prGUID,'is meer dan 100 karakters.'),' '))" />
285 - </xsl:if>
286 - </xsl:if>
287 - <xsl:if test="count(imsikb0101:email) &gt;0">
288 - <xsl:if test="string-length(imsikb0101:email) &gt; 100">
289 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Organization',string-join(('Lengte van email bij Organization',$prGUID,'is meer dan 100 karakters.'),' '))" />
290 - </xsl:if>
291 - </xsl:if>
292 - <xsl:if test="count(imsikb0101:fax) &gt;0">
293 - <xsl:if test="string-length(imsikb0101:fax) &gt; 20">
294 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Organization',string-join(('Lengte van fax bij Organization',$prGUID,'is meer dan 20 karakters.'),' '))" />
295 - </xsl:if>
296 - </xsl:if>
297 - <xsl:if test="count(imsikb0101:telephoneNumber) &gt;0">
298 - <xsl:if test="string-length(imsikb0101:telephoneNumber) &gt; 20">
299 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Organization',string-join(('Lengte van telephoneNumber bij Organization',$prGUID,'is meer dan 20 karakters.'),' '))" />
300 - </xsl:if>
301 - </xsl:if>
302 - <xsl:if test="count(imsikb0101:mobileNumber) &gt;0">
303 - <xsl:if test="string-length(imsikb0101:mobileNumber) &gt; 20">
304 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:Organization',string-join(('Lengte van mobileNumber bij Organization',$prGUID,'is meer dan 20 karakters.'),' '))" />
305 - </xsl:if>
306 - </xsl:if>
307 - </xsl:template>
308 - -->
309 - <xsl:template match="imsikb0101:remarks">
310 - <xsl:if test="string-length() &gt; 4000">
311 - <xsl:copy-of select="sikb:createRecord('ERROR','imsikb0101:remarks','Lengte van remarks is meer dan 4000.')" />
312 - </xsl:if>
313 - </xsl:template>
314 -
315 -<!-- xmlns:xs="http://www.w3.org/2001/XMLSchema" -->
316 -<!-- timePosition fix test (PAR)
317 - <xsl:template match="om:resultTime">
318 - <xsl:if test="count(//gml:timePosition) != 1">
319 - <xsl:copy-of select="sikb:createRecord('ERROR','on:resultTime','Er moet een gml:timePosition in om:resultTime aanwezig zijn.')"/>
320 - </xsl:if>
321 - <xsl:if test="count(//gml:timePosition) != 0">
322 - <xsl:variable select="//gml:timePosition" name="lvDateTime"/>
323 - <xsl:if test="not(lvDateTime castable as xs:date)">
324 - <xsl:copy-of select="sikb:createRecord('ERROR','gml:timePosition','gml:timePosition is niet geldig.')" />
325 - </xsl:if>
326 - </xsl:if>
327 - </xsl:template>
328 --->
329 -
330 -<!-- werk niet met deze regexp?
331 - <xsl:template match="om:resultTime">
332 - <xsl:if test="count(//gml:timePosition) != 1">
333 - <xsl:copy-of select="sikb:createRecord('ERROR','on:resultTime','Er moet een gml:timePosition in om:resultTime aanwezig zijn.')"/>
334 - </xsl:if>
335 - <xsl:if test="count(//gml:timePosition) != 0">
336 - <xsl:variable select="//gml:timePosition" name="lvDateTime"/>
337 - <xsl:variable name="DTEXP" select ='"^([\+-]?\d{4}(?!\d{2}\b))((-?)((0[1-9]|1[0-2])(\3([12]\d|0[1-9]|3[01]))?|W([0-4]\d|5[0-2])(-?[1-7])?|(00[1-9]|0[1-9]\d|[12]\d{2}|3([0-5]\d|6[1-6])))([T\s]((([01]\d|2[0-3])((:?)[0-5]\d)?|24\:?00)([\.,]\d+(?!:))?)?(\17[0-5]\d([\.,]\d+)?)?([zZ]|([\+-])([01]\d|2[0-3]):?([0-5]\d)?)?)?)?$"'/>
338 - <xsl:choose>
339 - <xsl:when test="$lvDateTime = ''">
340 - <xsl:copy-of select="sikb:createRecord('ERROR','gml:timePosition','gml:timePosition is niet gevuld.')" />
341 - </xsl:when>
342 - <xsl:when test="matches($lvDateTime, $DTEXP, 'm') ">
343 - </xsl:when>
344 - <xsl:otherwise>
345 - <xsl:copy-of select="sikb:createRecord('ERROR','gml:timePosition','gml:timePosition is niet geldig.')" />
346 - </xsl:otherwise>
347 - </xsl:choose>
348 - </xsl:if>
349 - </xsl:template>
350 - -->
351 -
352 - <xsl:template match="om:resultTime/gml:TimeInstant">
353 - <xsl:if test="count(gml:timePosition) > 0">
354 - <xsl:variable select="gml:timePosition" name="lvDateTime"/>
355 - <xsl:if test="not($lvDateTime castable as xs:dateTime)">
356 - <xsl:copy-of select="sikb:createRecord('ERROR','gml:timePosition', string-join(('gml:timePosition is niet geldig.', $lvDateTime), ' '))" />
357 - </xsl:if>
358 - </xsl:if>
359 - </xsl:template>
360 -
361 - <xsl:template match="imsikb0101:featureMember">
362 - <xsl:variable name="GmlId" select="substring-after(./*/@gml:id,'_')"/>
363 - <xsl:variable name="IdentificationImmetingen" select="./*/immetingen:identification/immetingen:NEN3610ID/immetingen:lokaalID"/>
364 - <xsl:variable name="IdentificationImSikb" select="./*/imsikb0101:identification/immetingen:NEN3610ID/immetingen:lokaalID"/>
365 - <xsl:variable name="ElementName" select="name(./*)"/>
366 - <xsl:choose>
367 -
368 - <xsl:when test="$IdentificationImmetingen != ''">
369 - <xsl:if test="$IdentificationImmetingen != $GmlId">
370 - <xsl:copy-of select="sikb:createRecord('ERROR',$ElementName,string-join(($ElementName,'met gml:id (',$GmlId,') heeft een afwijkend lokaalId (',$IdentificationImmetingen,').' ),' '))" />
371 - </xsl:if>
372 - </xsl:when>
373 -
374 - <xsl:otherwise>
375 - <xsl:if test="$IdentificationImSikb != $GmlId">
376 - <xsl:copy-of select="sikb:createRecord('ERROR',$ElementName,string-join(($ElementName,'met gml:id (',$GmlId,') heeft een afwijkend lokaalId (',$IdentificationImSikb,').' ),' '))" />
377 - </xsl:if>
378 - </xsl:otherwise>
379 -
380 - </xsl:choose>
381 -</xsl:template>
382 -
383 -
384 -
385 -
386 - <!-- verplichte velden -->
387 -
388 - <!-- functies -->
389 - <xsl:function name="sikb:createRecord">
390 - <xsl:param name="type" />
391 - <xsl:param name="title" />
392 - <xsl:param name="message" />
393 - <xsl:element name="LogRecord">
394 - <xsl:element name="Type">
395 - <xsl:copy-of select="$type" />
396 - </xsl:element>
397 - <xsl:element name="Title">
398 - <xsl:copy-of select="$title" />
399 - </xsl:element>
400 - <xsl:element name="Message">
401 - <xsl:copy-of select="$message" />
402 - </xsl:element>
403 - </xsl:element>
404 - </xsl:function>
405 -</xsl:stylesheet>

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